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SPAdes is known for being extremely memory-intensive. A useful practice during "Day 2" exercises is explicitly limiting its resource usage to prevent your PC from crashing.

Using tools like Trimmomatic to clean your raw data before assembly. SPADES-Day2-pc.rar

When running SPAdes (the executable often found in such packages as spades.py ), the --careful option is a critical feature for small genome projects (like bacteria, which are common in workshops). SPAdes is known for being extremely memory-intensive

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SPADES-Day2-pc.rar
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SPAdes is known for being extremely memory-intensive. A useful practice during "Day 2" exercises is explicitly limiting its resource usage to prevent your PC from crashing.

Using tools like Trimmomatic to clean your raw data before assembly.

When running SPAdes (the executable often found in such packages as spades.py ), the --careful option is a critical feature for small genome projects (like bacteria, which are common in workshops).